I have structured my model with include files, which I read into FEMAP with the "preserve include statements" ticked under preferences. In addition, in preferences, setting "Direct Output to": is set to "1..Model File Directory".
Now I have used relative include statements i.e. include "../'../model.dat", which are written relative to the directory in which the FEMAP model file is, but the files are not found in the analysis. They need to be written relative to one directory higher.
If I write the relative include statments so that an analysis output from FEMAP works i.e. they are written as if the model directory is one level higher, I then cannot modify any case control and submit my analysis directly since NX Nastran then doesn't find the include files, since they are in the incorrect directory.
It appears the current directory is incorrectly set when the analysis is submitted from FEMAP (Both 11.2 and 11.3)